[1]王昱堃,魏弘宜,陆海*. 毛果杨腺苷酸合成酶基因ACS-1的克隆和酶学分析[J].西北林学院学报,2014,29(05):78-83.[doi:doi:10.3969/j.issn.1001-7461.2014.05.14]
 WANG Yu-kun,WEI Hong-yi,LU Hai*. Cloning and Enzymatic Analysis of ACS-1 from Adenylate-forming Enzymes Superfamily in Populus trichocarpa Torr. & Gray[J].JOURNAL OF NORTHWEST FORESTRY UNIVERSITY,2014,29(05):78-83.[doi:doi:10.3969/j.issn.1001-7461.2014.05.14]
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 毛果杨腺苷酸合成酶基因ACS-1的克隆和酶学分析()
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《西北林学院学报》[ISSN:1001-7461/CN:61-1202/S]

卷:
第29卷
期数:
2014年05期
页码:
78-83
栏目:
出版日期:
2014-09-30

文章信息/Info

Title:
 Cloning and Enzymatic Analysis of ACS-1 from Adenylate-forming Enzymes Superfamily in Populus trichocarpa Torr. & Gray
文章编号:
1001-7461(2014)05-0078-06
作者:
 王昱堃魏弘宜陆海*
 (北京林业大学 生物科学与技术学院,北京 100083)
Author(s):
 WANG Yu-kunWEI Hong-yiLU Hai*
 (Biological Science and Technology, Beijing Forestry University, Beijing 100083, China)
关键词:
 毛果杨ACS4CL原核表达酶活性
Keywords:
 Populus trichocarpa Torr. & Gray ACS 4CL prokaryotic expression enzymatic activity
分类号:
S718.43
DOI:
doi:10.3969/j.issn.1001-7461.2014.05.14
文献标志码:
A
摘要:
 乙酰辅酶A连接酶(ACS)属于腺苷酸合成酶超基因家族,与4-香豆酸辅酶A连接酶(4CL)有着紧密的进化关系。通过对毛果杨数据库中4CL基因的同源检索,克隆获得了毛果杨基因Prt4CL8的序列(命名ACS-1,Genebank登录号XM_002329288.1)。序列分析表明,ACS-1具有ACS的关键残基以及C端末尾的PTS1序列;而4CL的高度保守结构域box Ⅰ和box Ⅱ在该蛋白中不保守。利用PCR技术克隆序列,构建表达载体pET30a,转化大肠杆菌并表达重组蛋白。对其进行酶学活性分析,结果证明该蛋白不能催化4CL常见底物,而对ACS底物乙酸钠具有明显催化活性:Km为(0.25±0.02)mmol·L-1Vm为(8.63±0.63)mmol·L-1。结果表明,ACS-1ACS家族成员,为腺苷酸合成酶超基因家族成员的鉴定与功能分析提供了一定的理论基础。
Abstract:
 Acetyl-CoA synthase (ACS) family is a subfamily of adenylate-forming enzymes superfamily, which has a close evolutionary relationship with 4-coumarate: CoA ligase (4CL) family. We cloned Prt4CL8 (renamed ACS-1, Genebank:XM_002329288.1) via BLAST in the database JGI of Populus trichocarpa. Sequence analysis showed that ACS-1 had the key residues of ACS and PTS1 at the end of C-terminal sequence. While the 4CL conservative domains which called box I and box II of ACS-1 weren’t similar with the other 4CLs. The ACS-1 gene was isolated by PCR and transformed into Escherichia coli by the individual expression construct pET30a and purified the recombinant protein. Enzymatic analysis showed that the recombinant protein had none catalytic activity to the substrates of 4CL, while had remarkable catalytic activity to sodium acetate, the substrates of ACS. As Km was (0.25±0.02) mmol·L-1 and Vm was (8.63±0.63) mmol·L-1. The Results demonstrated that ACS-1 was one of the ACS families, and supplied theoretical foundation in identifying and functional analysis of members from adenylate-forming enzymes superfamily.

参考文献/References:

 [1]SCHMELZ S,NAISMITH JH.Adenylate-forming enzymes[J].Curr. Opin. Struct Biol.,2009,19(6):666-671.
[2]MAY JJ,WENDRICH TM,MARAHIEL MA.The dhb operon of Bacillus subtilis encodes the biosynthetic template for the catecholic siderophore 2,3-dihydroxybenzoate glycine-threonine trimeric ester bacillibactin[J].Biol Chem,2001,276(10):7209-7217.
[3]MARAHIEL MA,STACHELHAUS T,MOOTZ HD.Modular peptide synthetases involved in nonribosomal peptide synthesis[J].Chem. Rev.,1997,97(7):2651-2674.
[4]CONTI E,FRANKS NP,BRICK P.Crystal structure of firefly luciferase throws light on a superfamily of adenylate-forming enzymes[J].Structure,1996,4(3):287-298.
[5]WHETTEN R,SEDEROFF R.Lignin biosynthesis[J].The Plant Cell,1995,7(7):1001-1013.
[6]EHLTING J,BTTNER D,WANG Q,et al.Three 4-coumarate:coenzyme a ligases in Arabidopsis thaliana represent two evolutionarily divergent classes in angiosperms[J].The Plant Journal,1999,19(1):9-20.
[7]HAMBERGER B,HAHLBROCK K.The 4-coumarate:CoA ligase gene family in Arabidopsis thaliana comprises one rare,sinapate-activating and three commonly occurring isoenzymes[J].Proceedings of the National Academy of Sciences,2004,101(7):2209-2214.
[8]GUI JS,SHEN JH,LI LG.Functional characterization of evolutionarily divergent 4-coumarate:coenzyme a ligases in rice[J].Plant Physiology,2011,157(2):574-586.
[9]HU W J,KAWAOKA A,TSAI C J,et al.Compartmentalized expression of two structurally and functionally distinct 4-coumarate:CoA ligase genes in aspen (Populus tremuloides)[J].Proc. Natl. Acad Sci.,1998,95(9):5407-5412.
[10]倪志勇,王娟,吕萌,等.棉花4-香豆酸辅酶A连接酶基因克隆及原核表达[J].西北植物学报,2010,30(3):0429-0436.
NI Z Y,WANG J,LV M,et al.Cloning and prokaryotic expression of Gh4CL2 gene from Gossypium hirsutum L. [J].Acta Botanica Boreali-Occidentalia Sinica,2010,30(3):0429-0436.(in Chinese)
[11]EHLTING J,SHIN JJK,DOUGLAS CJ.Identification of 4-coumarate:coenzyme a ligase (4CL) substrate recognition domains[J].The Plant Journal,2001,27(5):455-465.
[12]RAES J,ROHDE A,CHRISTENSEN JH,et al.Genome-wide characterization of the lignification toolbox in Arabidopsis[J].Plant Physiology,2003,133(3):1051-1071.
[13]EHLTING J,MATTHEUS N,AESCHLIMAN DS,et al.Global transcript profiling of primary stems from Arabidopsis thaliana identifies candidate genes for missing links in lignin biosynthesis and transcriptional regulators of fiber differentiation[J].The Plant Journal,2005,42(5):618-640.
[14]COSTA MA,BEDGAR DL,MOINUDDIN SGA,et al.Characterization in vitro and in vivo of the putative multigene 4-coumarate:CoA ligase network in Arabidopsis: syringyl lignin and sinapate/sinapyl alcohol derivative formation[J].Phytochemistry,2005,66(17):2072-2091.
[15]KOO AJ,CHUNG HS,KOBAYASHI Y,et al.Identification of a peroxisomal acyl-activating enzyme involved in the biosynthesis of jasmonic acid in arabidopsis[J].Journal of Biological Chemistry,2006,281(3):33511-33520.
[16]KIENOW L,SCHNEIDER K,BARTSCH B,et al.Jasmonates meet fatty acids: functional analysis of a new acyl-coenzyme a synthetase family from Arabidopsis thaliana[J].Journal of Experimental Botany,2008,59(2):403-419.
[17]REUMANN S,MA C,LEMKE S,et al.AraPerox a database of putative arabidopsis proteins from plant peroxisomes[J].Plant Physiology,2004,136(1):2587-2608.
[18]SHI R,SUN YH,LI QZ,et al.Towards a systems approach for lignin biosynthesis in Populus trichocarpa: transcript abundance and specifi city of the monolignol biosynthetic genes[J].Plant Cell Physiol,2010,51(1):144-163.
[19]李永丽,周洲,范晶超,等.2001杨组培再生体系建立[J].西北林学院学报,2012,27(6):83-87.
LI Y L,ZHOU Z,FAN J C,et al.Establishment of regeneration system for Populus×euramericana cv. ‘2001’ [J].Journal of Northwest Forestry University,2012,27(6):83-87.(in Chinese)
[20]张世红,李坤霞,朱淑新,等.毛白杨成熟效应与组培幼化[J].西北林学院学报,2010,25(4):83-86.
ZHANG S H,LI K X,ZHU S X,et al.Cyclophysis and rejuvenation of Populus tomentosa by tissue culture [J].Journal of Northwest Forestry University,2010,25(4):83-86.(in Chinese)
[21]ALLINA SM,PRI-HADASH A,THEILMANN DA,et al.4-coumarate:coenzyme a ligase in hybrid poplar[J].Plant Physiol,1998,116(2):743-754.
[22]FERNNDEZ-VALVERDE M,REGLERO A,MARTINEZ-BLANCO H,et al.Purification of pseudomonas putida acyl coenzyme a ligase active with a range of aliphatic and aromatic substrates[J].Applied and Environmental Microbiology,1993,59(4):1149-1154.
[23]KHURANA P,GOKHALE RS,MOHANTY D.Genome scale prediction of substrate specificity for acyl adenylate superfamily of enzymes based on active site residue profiles[J].BMC Bioinformatics,2010,11(57):1470-2105.
[24]李欢欢,饶国栋,范丙友,等.重组毛白杨4-香豆酸:辅酶A连接酶催化不同肉桂酸衍生物的酶促动力学研究[J].成都大学学报:自然科学版,2009,28(1):001-004.
LI H H,RAO G D,FAN B Y,et al.Kinetic parameters of a recombinant 4-coumarate: coenzyme a ligase from Populus tomentosa [J].Journal of Chengdu University:Nat.Sci. Edi.,2009,28(1):001-004.(in Chinese)
[25]王晓雪,蒋湘宁,陆海.毛白杨4-香豆酸:辅酶A连接酶338Val缺失突变分析[J].北京林业大学学报,2009,31(3):84-88.
WANG X X,JIANG X N,LU H.Catalytic properties of 338Val-deleted mutant of 4-coumarate: coenzyme a ligase from Populus tomentosa[J].Journal of Beijing Forestry University,2009,31(3):84-88.(in Chinese)

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备注/Memo

备注/Memo:
 收稿日期:2014-01-03修回日期:2014-03-07
基金项目:国家自然科学基金(31170574,30671697)。
作者简介:王昱堃,女,在读硕士,研究方向:植物生物化学与分子生物学。E-mail:abby777903@163.com
*通信作者:陆海,男,教授,研究方向:植物生物化学与分子生物学。E-mail:luhai1974@bjfu.edu.cn
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